Tagged with snps

• Right-Sizing the Sequencing

  January 24, 2023

  

  So... I appears that we cannot just make a de novo assembly with _all_ the sequences.

  • snps

• Demultiplexing

  January 16, 2023

  

  If you have to take all the DNA, randomly chop it up, give unique barcodes to each individual then you will eventually have to try to figure out how to put it all back together. I used `process_radtags` since it was easiest.

  • snps

• Installing dDocent

  January 12, 2023

  

  Biologists are, characteristically, rather crappy programmers. As such, there is a lot of cobbling that is done to accomplish some tasks. This is an example of that cobbling for creating *de novo* genomic assemblies for generic SNP calling.

  • snps